rs2686111 chr3:197573383 A>G
- Sequence
tgtgtgacaagtacagtgggggtc[A/G]gcggggggtgggccttgggatgtt
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- RARA_HUMAN PPARG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 1.76 | -1.38 | 1.33 | n/a | No Hit | |||
| PPARG_HUMAN | 1.69 | -1.72 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood