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rs268743 chr5:33298339 A>G

Sequence
tgggtgaacagcggtttgatacca[A/G]aagctccagagaaactgcaactaa
ASB in cell types
22RV1 (prostate carcinoma) PANC1 (pancreatic ductal adenocarcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.06 0.68 3.0·10-71.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Brain_Cerebellar_Hemisphere Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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