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rs26930 chr16:2143517 T>C

Sequence
ttctgtgtggcagatcacctctgc[T/C]gccttcccgtctgggagcacctga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MTG16_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG16_HUMAN 2.57 n/a 1.1·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Amygdala Brain_Nucleus_accumbens_basal_ganglia Brain_Spinal_cord_cervical_c-1 Cells_Cultured_fibroblasts Esophagus_Mucosa Heart_Left_Ventricle Lung Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Thyroid

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