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rs2696398 chr2:235746508 A>G

Sequence
aggagggattcttaggcctaatgc[A/G]ccctctagtgttcaccaggagaca
ASB in cell types
A549 (lung carcinoma) neural cell upper lobe of left lung CD34+ stem cells-derived erythroblasts
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.89 1.23 1.004.0·10-31 1.48 3.33 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GRASP body mass index (bmi) hdl cholesterol mitral annular calcium obesity with early age of onset (age >2) prop taste detection threshold triglycerides change with statins
GTEx eQTL Muscle_Skeletal

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