rs27046 chr5:66144136 G>C
- Sequence
gtgaaacgagcagcaacagcccca[G/C]ggacccgggagctggaggccgcag
- ASB in cell types
- GM12878 (female B-cells) SUM159PT (pleiomorphic breast carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- FOXK2_HUMAN CEBPB_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.94 | -3.37 | 1.33 | n/a | n/a | |||
| CEBPB_HUMAN | 1.38 | -0.34 | 1.98 | n/a | No Hit | |||
| FLI1_HUMAN | 1.74 | -1.53 | 1.33 | n/a | No Hit |
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