rs27059 chr5:1479563 G>C
- Sequence
gcttatctgggcatcctggtgtaa[G/C]ctcgtgtctgcatcaaccactgtg
- ASB in cell types
- CD14+ monocytes macrophages
- ASB for transcription factors
- STAT1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.15 | 2.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.68 | 0.61 | 1.36 | 3.80 | Concordant |
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Motif analysis
