rs2710867 chr1:998719 G>C
- Sequence
aacccaacgcgggggcagagggcg[G/C]gtgcgcatgcggggctgcagggat
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZBT26_HUMAN ZBT8A_HUMAN SP3_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | n/a | 0.68 | 2.00 | n/a | n/a | |||
| ZBT8A_HUMAN | n/a | 2.48 | 2.00 | n/a | n/a | |||
| SP3_HUMAN | -2.06 | 2.29 | 2.00 | -0.89 | Weak Discordant | |||
| ZFX_HUMAN | -2.06 | 2.29 | 2.00 | n/a | No Hit | |||
| ZN189_HUMAN | -1.86 | 2.10 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Spleen, Thyroid, Whole_Blood