rs271392 chr1:29689521 G>T
- Sequence
ggggcctcccctcccccctccggc[G/T]ttacagctcccacgacaccaggtg
- ASB in cell types
- foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.04 | 0.56 | 1.54 | -0.09 | Weak Concordant |
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Motif analysis
