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rs271739 chr1:234528201 G>A

Sequence
tctcccagcctggactggagctgc[G/A]tggctgccttccttctgtgcggct
ASB in cell types
HEK293 (embryonic kidney) HEK293T (embryonic kidney)
ASB for transcription factors
ZIC2_HUMAN ZN189_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN 3.11 n/a 8.0·10-51.00 3.00 n/a n/a
ZN189_HUMAN 2.96 n/a 2.4·10-31.00 4.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Breast_Mammary_Tissue Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Ovary Pituitary Skin_Sun_Exposed_Lower_leg Thyroid

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