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rs271828 chr19:18231667 C>A

Sequence
agcagggaagtaacccatccaagg[C/A]cactcagcctggactgaaatctgg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 0.94 1.59 0.940.04 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Nerve_Tibial Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Testis

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