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rs2721882 chr8:132520708 G>C

Sequence
gcttaattagctacttaggaaggg[G/C]aactgacaggctcttagccatggt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MTA2_HUMAN IKZF1_HUMAN IKZF2_HUMAN ARNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN 1.38 n/a 1.3·10-81.00 1.33 n/a n/a
IKZF1_HUMAN 1.73 -2.01 1.3·10-61.00 1.33 n/a No Hit
IKZF2_HUMAN 1.95 -2.21 2.0·10-41.00 1.33 n/a n/a
ARNT_HUMAN 2.15 n/a 5.9·10-31.00 1.33 n/a No Hit
REQU_HUMAN 1.96 -1.64 0.021.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2) refractive error
GTEx eQTL Heart_Left_Ventricle

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