ADASTRA v1.6.10
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rs272826
chr1:36162458
C
>
T
Sequence
ggtaatgtgactgcctaccagaaa[C/T]agcatgacataagggttttaaggg
ASB in cell types
monocyte-derived macrophages
upper lobe of left lung
ASB for transcription factors
SPI1_HUMAN
EP300_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
1.35
n/a
0.01
1.00
2.50
n/a
No Hit
EP300_HUMAN
-1.88
1.95
1.00
0.03
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
ldl cholesterol
,
simpson-angus scale
GTEx eQTL
Artery_Tibial
,
Spleen
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)