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rs2729578 chr16:1048684 G>A

Sequence
cgcactcacaggggcgggctgggc[G/A]gggctgggccggggaggcgggctg
ASB in cell types
K562 (myelogenous leukemia) T47D (invasive ductal carcinoma)
ASB for transcription factors
NRF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN -0.34 2.51 0.861.2·10-6 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Frontal_Cortex_BA9

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