rs2732615 chr17:46286690 T>C
- Sequence
aaaggaatttgtaatgtaagtgta[T/C]aacaaatgtagaaaaaatctgctt
- ASB in cell types
- LNCaP (prostate carcinoma) neural cell foreskin keratinocyte H929 (plasma cell myeloma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.41 | -1.02 | 3.43 | n/a | No Hit | |||
| RAD21_HUMAN | 2.77 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, body mass index (bmi), college completion, height, infant head circumference, intracranial volume, ldl cholesterol, lung function, forced expiratory volume in 1 second (fev1), obesity (body mass index (bmi)), parkinsons disease, red blood cell count (rbc), systolic blood pressure (sbp), years of education