rs273413 chr8:131519547 G>A
- Sequence
tcatcagtgcctcccaatgtctac[G/A]gaacaaagttcaaatgccatagtt
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- FOXA2_HUMAN TBX3_HUMAN FOXA1_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -0.85 | 1.46 | 1.33 | n/a | No Hit | |||
| TBX3_HUMAN | -1.05 | 2.25 | 1.33 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.28 | 1.28 | 1.33 | n/a | No Hit | |||
| HNF4A_HUMAN | -1.14 | 1.51 | 1.33 | 0.14 | Weak Concordant | |||
| EP300_HUMAN | -1.97 | 1.89 | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 9
Motif analysis
