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rs274032 chr7:23334940 C>G

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN 0.18 1.75 1.003.4·10-5 1.88 n/a n/a
JUN_HUMAN -0.23 1.19 1.001.0·10-4 2.03 n/a No Hit
BCL3_HUMAN -0.52 1.23 0.983.7·10-3 2.00 n/a n/a
GCR_HUMAN -0.68 1.78 1.006.7·10-3 2.00 n/a No Hit
FOXA2_HUMAN 0.35 1.06 1.000.01 1.63 n/a No Hit
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Motif analysis

NFIA_HUMAN Concordant
NFIA_HUMAN pic

Genetic associations

GRASP hdl cholesterol hdl cholesterol change with statins obesity with early age of onset (age >2) parkinsons disease triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Uterus Vagina Whole_Blood

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