rs274297 chr10:24945023 G>A
- Sequence
ctgcctcctgagctttgcactggc[G/A]cctcctcttgcctgcaacactctt
- ASB in cell types
- GM12878 (female B-cells) SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.80 | 0.39 | 1.24 | -2.47 | Concordant | |||
| IKZF1_HUMAN | 1.51 | -0.93 | 1.33 | n/a | No Hit |
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Motif analysis
