rs274671 chr5:6712420 T>G
- Sequence
ctttggacctcacaggatgtgtgg[T/G]tggcgctgtattccaaacagtgcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) neural cell MDA-MB-453 (breast adenocarcinoma) heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.13 | 0.99 | 1.25 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.37 | 1.98 | 1.42 | n/a | No Hit |
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