rs274753 chr1:36099983 C>G
- Sequence
agggcgcctgaggatctgatggct[C/G]tcagggaggcaggggatttggggg
- ASB in cell types
- VCaP (prostate carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 0.42 | 1.39 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Muscle_Skeletal, Thyroid, Whole_Blood