rs2748217 chr5:150522773 G>C
- Sequence
aacaaagcagggaaaggacacaga[G/C]ggtagtgggggtgggagcttgaca
- ASB in cell types
- T47D (invasive ductal carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- PRGR_HUMAN SMAD4_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | 2.12 | 0.05 | 2.50 | n/a | No Hit | |||
| SMAD4_HUMAN | -1.98 | 1.79 | 1.33 | n/a | No Hit | |||
| ESR1_HUMAN | 1.81 | -3.04 | 2.50 | n/a | No Hit |
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