rs278151 chr12:119678689 A>G
- Sequence
ttatccatgctgtcacagatgaca[A/G]gattccttttgtaaggctcagcag
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN629_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN629_HUMAN | -2.98 | 2.35 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, bipolar disorder in alcoholics, coronary artery lesions in kawasaki disease, diastolic blood pressure (dbp), ldl cholesterol change with statins, major depressive disorder, parkinsons disease
GTEx eQTL Artery_Aorta, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood