rs2786808 chr1:16615533 G>A
- Sequence
ggtgggaggattgcttgagctcag[G/A]aggttgaggctgcagtgagccatg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZN770_HUMAN ZBT17_HUMAN GATA1_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN770_HUMAN | n/a | 3.48 | 2.00 | -2.91 | Discordant | |||
| ZBT17_HUMAN | n/a | 3.32 | 1.33 | n/a | No Hit | |||
| GATA1_HUMAN | n/a | 2.74 | 1.50 | n/a | No Hit | |||
| ZFX_HUMAN | -0.53 | 2.67 | 1.56 | n/a | No Hit | |||
| ZNF24_HUMAN | -1.62 | 2.67 | 2.25 | n/a | n/a |
Items per page:
1 – 5 of 34
Motif analysis
