ADASTRA v1.6.10
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rs278864
chr1:77676882
G
>
A
Sequence
agttgagaaaattaccaatttgga[G/A]gaaaacatttagattctcatttca
ASB in cell types
K562 (myelogenous leukemia)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.31
0.66
1.00
0.02
1.93
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
GTEx eQTL
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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