rs2794730 chr1:211683611 A>G
- Sequence
ggtccatgatgccagatgttgcag[A/G]aagagcaaataaggtaagggcaga
- ASB in cell types
- GM12878 (female B-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | -3.07 | 2.81 | 1.33 | -1.05 | Weak Discordant |
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Motif analysis
