rs2795597 chr10:29947669 G>C
- Sequence
gcagtctgcctgctgggtggaggt[G/C]gggggtccaggccaggatgggctg
- ASB in cell types
- keratinocytes pancreas
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 1.47 | -0.97 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.92 | -0.06 | 1.24 | -0.13 | Weak Concordant |
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Motif analysis
