rs2796839 chr10:16891915 A>C
- Sequence
tgcaatacccaatatgccctttct[A/C]tcaacagacaactatctcaaacaa
- ASB in cell types
- K562 (myelogenous leukemia) SUM159PT (pleiomorphic breast carcinoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN HDAC1_HUMAN ZN316_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.23 | 1.72 | 1.56 | n/a | No Hit | |||
| HDAC1_HUMAN | -1.00 | 1.56 | 2.00 | n/a | n/a | |||
| ZN316_HUMAN | -1.31 | 1.02 | 2.00 | n/a | n/a |
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