rs2799063 chr1:998726 A>G
- Sequence
cgcgggggcagagggcgggtgcgc[A/G]tgcggggctgcagggatgcggagg
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZBT26_HUMAN ZBT8A_HUMAN SP3_HUMAN ZN189_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | n/a | 0.71 | 2.00 | n/a | n/a | |||
| ZBT8A_HUMAN | n/a | 2.50 | 2.00 | n/a | n/a | |||
| SP3_HUMAN | -2.26 | 2.33 | 2.00 | 1.58 | Weak Concordant | |||
| ZN189_HUMAN | -2.17 | 2.25 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Spleen, Thyroid, Whole_Blood