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rs280043 chr17:33664173 T>C

Sequence
gatagactccgcctcctctgacct[T/C]agggcccttacacatgttgcttgc
ASB in cell types
cranial neural crest cells
ASB for transcription factors
COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 2.00 n/a 0.011.00 2.00 0.40 Weak Discordant
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Motif analysis

COT1_HUMAN Weak Discordant
COT1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) irritible bowel syndrome ldl cholesterol partial epilepsy schizophrenia taste change in healthy volunteers in response to topiramate treatment (less carbonation) tetrology of fallot

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