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rs281255 chr15:47379177 T>C

Sequence
tctcactaataaattaattcaaat[T/C]gtttacatttctctgaccaaattt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.47 -0.27 4.2·10-61.00 1.60 -6.98 Concordant
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Motif analysis

FOXA1_HUMAN Concordant
FOXA1_HUMAN pic

Genetic associations

GRASP birth weight
GTEx eQTL Cells_Cultured_fibroblasts Nerve_Tibial

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