rs2816030 chr1:18531104 T>C
- Sequence
gtctctttcctgtgctttggggct[T/C]agcgaatgtcgccaccatccggtg
- ASB in cell types
- foreskin keratinocyte H1 (embryonic stem cells) neural cell epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.64 | -0.31 | 1.58 | n/a | No Hit | |||
| RAD21_HUMAN | 1.46 | -0.19 | 1.54 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP infant head circumference, paternal transmission distortion, salmonella-induced pyroptosis, serum creatinine, spine bone mineral density (bmd)