rs28378376 chr8:15540736 G>A
- Sequence
gaggccctggggcgtttccgggac[G/A]tggagttagcagggttctgacttg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -0.73 | 1.73 | 2.00 | -1.26 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Ovary