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rs284574 chr2:216498338 A>G

Sequence
gctggcctgcaacttgttctggga[A/G]tggaaccttggattttagtcacca
ASB in cell types
GM12878 (female B-cells) HEK293T (embryonic kidney)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 1.87 0.07 0.020.77 1.75 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

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