rs28469625 chr21:41817487 T>G
- Sequence
cacttggtccctgacactgactaa[T/G]tccctggtcagggctagaatttct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.59 | 0.23 | 1.31 | |||
| GM12878 (female B-cells) | 0.16 | 0.79 | 1.29 |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid