rs2850998 chr4:101211461 A>T
- Sequence
aaatgcaataatgtttattctgca[A/T]gcacagtttgctccttgaatatct
- ASB in cell types
- A549 (lung carcinoma) prostate tumor
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.45 | -0.05 | 1.42 | -1.19 | Weak Concordant | |||
| JUN_HUMAN | 1.13 | -0.40 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.54 | -0.93 | 1.33 | n/a | No Hit |
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Motif analysis
