rs285206 chr20:43667902 C>T
- Sequence
ccccagcttggttcggtttgagac[C/T]tctcttcctgttcccacgaggagt
- ASB in cell types
- Mutu-1 (Epstein-Barr virus-related Burkitt lymphoma)
- ASB for transcription factors
- COE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COE1_HUMAN | 2.21 | -2.53 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, height, infant head circumference, microalbuminuria, refractive error, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellum, Cells_EBV-transformed_lymphocytes, Esophagus_Muscularis, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood