rs2853117 chr11:133835371 T>G
- Sequence
aaatgtggtttttgtgtggaaacg[T/G]caccatctggtggtttctagtgaa
- ASB in cell types
- Peyer's patch gastroesophageal sphincter GM12878 (female B-cells) pancreas
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.08 | 1.67 | 1.37 | 2.44 | Concordant | |||
| RAD21_HUMAN | -0.20 | 1.36 | 1.30 | n/a | n/a |
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Motif analysis
