rs28534711 chr1:920719 T>G
- Sequence
gcagggtgtgggcacacctgtgct[T/G]ctgagcccacgtgcccttgccggt
- ASB in cell types
- Jurkat (T-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- MYB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYB_HUMAN | 1.67 | -0.83 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Nerve_Tibial, Ovary, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood