rs286234 chr19:11798757 G>A
- Sequence
gtgcccggcctagcgtccagatac[G/A]tggaagaggggctgggtggaacca
- ASB in cell types
- keratinocytes foreskin keratinocyte spleen
- ASB for transcription factors
- CTCF_HUMAN SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.07 | 0.21 | 1.41 | n/a | No Hit | |||
| SNAI2_HUMAN | 2.10 | n/a | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Tibial, Brain_Amygdala, Esophagus_Mucosa, Heart_Atrial_Appendage, Pancreas, Spleen, Stomach, Thyroid