rs2867079 chr3:146189668 C>G
- Sequence
ctgggcagctgggacacaggatta[C/G]aacgattggcctcatcagatttct
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte gastroesophageal sphincter
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.23 | 0.83 | 1.96 | n/a | n/a | |||
| RAD21_HUMAN | 0.54 | 0.89 | 1.71 | n/a | n/a | |||
| CTCF_HUMAN | 0.59 | 0.68 | 1.38 | n/a | No Hit |
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