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rs28675289 chr16:31451931 C>T

Sequence
ctgctgcgtctcactccccacacc[C/T]ggcagaggcctctttggctctgcc
ASB in cell types
aortic adventitial fibroblasts
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.22 0.42 0.010.69 1.60 -4.03 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Colon_Transverse Skin_Sun_Exposed_Lower_leg

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