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rs2868180 chr7:75961490 T>C

Sequence
tgcacctgtgctttgctcctggaa[T/C]gctagagtgctttaaagaaaaata
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.69 0.17 1.3·10-30.77 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose homa-b neuroblastoma (brain cancer)
GTEx eQTL Brain_Caudate_basal_ganglia Brain_Cortex Cells_Cultured_fibroblasts Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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