ADASTRA v1.6.10
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rs288459
chr11:31022258
T
>
C
Sequence
tcttcctagtttctggtggtttcc[T/C]gccaactcttggtgtttattgact
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
2.38
-0.11
5.7·10
-3
1.00
1.83
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
chronic kidney disease
,
serum creatinine
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Breast_Mammary_Tissue
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Ovary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)