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rs288459 chr11:31022258 T>C

Sequence
tcttcctagtttctggtggtttcc[T/C]gccaactcttggtgtttattgact
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 2.38 -0.11 5.7·10-31.00 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease serum creatinine
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Breast_Mammary_Tissue Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Ovary Skin_Not_Sun_Exposed_Suprapubic Testis Thyroid

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