ADASTRA v1.6.10
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rs289396
chr15:85026728
G
>
A
Sequence
aaaagtttgaggctgcagtgaact[G/A]tgatcataccactgcattccagcc
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.10
0.74
1.00
0.02
2.00
GM12878 (female B-cells)
0.42
0.53
0.74
0.03
1.34
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Colon_Transverse
,
Muscle_Skeletal
,
Spleen
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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