rs28972709 chr21:10656910 G>A
- Sequence
atttgagtccattctattccattc[G/A]ggtccattccattccattcgagtc
- ASB in cell types
- HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- TBX3_HUMAN FOXK2_HUMAN ZNF24_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | -3.41 | 2.45 | 2.25 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 1.72 | 2.50 | n/a | n/a | |||
| ZNF24_HUMAN | n/a | 2.91 | 4.25 | n/a | n/a |
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