rs289817 chr15:63503476 G>A
- Sequence
ggctccttcgccgggttttacaag[G/A]agccccaacttggaagcaatattt
- ASB in cell types
- K562 (myelogenous leukemia) macrophages fetal bone marrow-derived mononuclear cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CEBPB_HUMAN KMT2A_HUMAN STAT1_HUMAN EP300_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 2.60 | 0.71 | 1.83 | n/a | No Hit | |||
| KMT2A_HUMAN | 2.44 | -0.25 | 1.42 | n/a | n/a | |||
| STAT1_HUMAN | 1.31 | n/a | 2.50 | 4.13 | Discordant | |||
| EP300_HUMAN | -1.64 | 2.16 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -0.21 | 1.75 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Esophagus_Mucosa, Heart_Left_Ventricle, Whole_Blood