rs290199 chr11:85710112 T>A
- Sequence
tggcattcaaaggcatccattttc[T/A]ggcatgcttaatatttaaaatcca
- ASB in cell types
- SK-N-SH (neuroblastoma)
- ASB for transcription factors
- HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | 1.21 | -0.84 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, college completion, hdl cholesterol change with statins, height, triglycerides, urinary albumin-to-creatinine ratio, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid