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rs290444 chr20:54068009 A>G

Sequence
cctgccccacagtcctgcagctcc[A/G]tgtgtgtgcccgcacagtgctagg
ASB for transcription factors
SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA5_HUMAN -2.65 2.28 1.000.04 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Esophagus_Mucosa Lung Spleen

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