rs291241 chr11:86302319 A>G
- Sequence
ggcattcttgccgctggcccagtc[A/G]ctatgtagtggaggggcagacacc
- ASB in cell types
- K562 (myelogenous leukemia) cranial neural crest cells HEK293T (embryonic kidney) 786-O (renal carcinoma)
- ASB for transcription factors
- COT1_HUMAN TF65_HUMAN AP2A_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.67 | 0.10 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.71 | -1.69 | 2.00 | n/a | No Hit | |||
| AP2A_HUMAN | 2.02 | -1.71 | 2.00 | n/a | No Hit | |||
| RFOX2_HUMAN | -2.26 | 2.33 | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | -2.09 | 2.17 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, chronic kidney disease, ldl cholesterol change with statins, microalbuminuria, partial epilepsy, total cholesterol