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rs292100 chr11:86371280 T>C

Sequence
ccacaagattgctaacttccccaa[T/C]tgcctctatagataacattactat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
EMSY_HUMAN KDM1A_HUMAN TIF1A_HUMAN NFE2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EMSY_HUMAN n/a 2.61 1.002.5·10-4 2.00 n/a n/a
KDM1A_HUMAN n/a 2.18 1.005.9·10-4 2.00 n/a n/a
TIF1A_HUMAN -1.62 2.04 1.003.2·10-3 2.00 n/a n/a
NFE2_HUMAN -1.66 1.99 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Testis

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