rs294377 chr11:30605113 C>A
- Sequence
tcaatactcttcaagtcaggtgtg[C/A]atctccccctgtccaccaggttaa
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN IKZF1_HUMAN TBX21_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | -2.59 | 2.32 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -1.51 | 1.57 | 1.33 | n/a | No Hit | |||
| TBX21_HUMAN | n/a | 1.72 | 1.33 | 5.07 | Concordant | |||
| PKNX1_HUMAN | -1.67 | 1.83 | 1.33 | n/a | No Hit |
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Motif analysis
